bioinformatics

21 - 62

Array
Array centre	Washington Array Centre
Bioconductor	open source and open development software project for the analysis and comprehension of genomic data
Collection of links	THE ANALYSIS OF GENE EXPRESSION DATA:
GeneClust	Tool for exploratory analysis of gene expression microarray data.
MA-ANOVA	set of functions written in Matlab for the analysis of variance on microarray data
Microarray	MADAM, Spotfinder, Arrayviewer, Multiexperimentviewer
SAM	Significance Analysis of Microarrays
COG	COG database
GSCope	SOM Clustering and Gene-Ontology Analysis of Microarray Data
general	Pat Brown
MicroArray	MicroArray related activities at the EBI
Venny	Venn diagram

bioinformatics
COG	COG database
CMBI	The CMBI offers a course programme with selected topics from Cheminformatics and Bioinformatics.
EMBOSS	EMBOSS The European Molecular Biology Open Software Suite
GCT	The Genomics CenterT
PSB	PSB Online Proceedings

genomics
BRIG	BLAST Ring Image Generator
JCVI tools	Comparative genomics tools
OBO	Open Biomedical Ontologies
Artemis etc...	Sanger Software
MAUVE	Multiple genome alignment

Informatics_tutorials
PHP	Handleiding and manual
SQL	SQL tutorial on the building blocks of SQL

Information
Source code	O Reilly

IT
MSQL home	homepage MSQL
MySQL	MySQL original site
PHP	PHP referentie
VSLsoftw	Virtual Shareware LibrarySoftware

MicroArray
general	Pat Brown
MicroArray	MicroArray related activities at the EBI
Venny	Venn diagram

Miscellaneous
Bioinformatics	Startpagina.nl
Overview	Loads of links

motifs
MEME	Motif finding
SCOPE	Suite for Computational identification Of Promoter Elements

pathway
GSCope	SOM Clustering and Gene-Ontology Analysis of Microarray Data
Bioch Pathw	Biochemical Pathways.
KEGG API	API wdsl manual for KEGG
KEGG compounds	Compounds database
PRODORIC	PROkaryotIC Database Of Gene Regulation And Regulatory NETworks

protein
PRF in Japan.	Protein Research Foundation in Japan.
Proteopedia	Wiki of Proteins and 3D
STRAP	Interactive Structure based Sequences Alignment Program STRAP

RNA
RNA-seq	RNA-seq software

R_statistics
Bioconductor	open source and development software project for analysis and comprehension of genomic data
R	A language and environment for statistical computing and graphics
R	Windows version
Zelig	GUI for R

server
AntiBP	Prediction of the antibacterial peptides bacteriocin
GEO	Gene Expression Omnibus

software
GSCope	SOM Clustering and Gene-Ontology Analysis of Microarray Data
Artemis etc...	Sanger Software
1 page 4 all	Big overview of DNA-array software
ArrayPro	Software: Media Cybernetics
ArrayPro	Software: Media Cybernetics
BioEdit	biological sequence alignment editor win98/nt
Cell Designer	Network reconstruction System Biology
Cyber-T GeneX	Cyber-T is a Web interface designed to reliably detect changes in gene expression
Cytoscape	Network reconstruction System Biology
Delphi	Delphi components Jans-freeware
Genesis	Clustering collection of many methods Freeware
GenMAPP	Pathway micro-array visualisation tool Freeware
Java netbeans	Net Beans
Misc	Genetics and Molecular Biology Software for the PC
SAM	Significance Analysis of Microarrays Freeware
TIGR software	Genomic and Array software Freeware
MAUVE	Multiple genome alignment
MIT	MIT VoigtLab webtools

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[ page last modified 1970-01-01 ]

[database last updated 2012-05-17]